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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835686.1_cds_XP_016506013.1_19285
CDS Infomation

[gene=LOC107823820] [db_xref=GeneID:107823820] [protein=protein CHROMATIN REMODELING 25-like] [protein_id=XP_016506013.1] [location=join(68851..69047,69810..70190,70652..70738,70841..71081,71152..71277,71369..71425,71510..71596,71854..71949,75128..75178,75771..75845,75953..76039,77096..77187,77273..77405,78247..78366,78452..78565,78656..78739,78821..78895,78965..79023,81962..82136,82211..82309,84036..84479)] [gbkey=CDS]
Sequence

ATGGAGGCCGAGGAGGAGGAGGAGGTTCTTTCGTCGTCAGAACGTGATGATTCGAGCGAC
GAATTCCTTTGCGAGCCCGATGATGACATCGATTTCGAATCTAATAGCGGCGATGATGAC
CAGAATGTAGAATCTCACGCGGGTACCAGTTCGCCTGATGAAGATCGAAAATCGCAAAAT
GTTGATGCTCTTGTGAGGGGTAATCTTATTGTGAAAAGACAATCCCTACTTCCACGAGTC
TATTCAGTGACAGATGCAGCAGCCAATCTCCGAAAGCCATTCAAACCTCCAAGCTCCAAT
GGTTACAGTAGTACCAATGAGCATCTAGCCCGTCGTCTTTGTGCTCGTAAAAGGTTTGTG
CCATGGGGGTCAACAAGGCCAGTGTTGCTTGCAATTACAAACAGGCTGCACGCTCCAGAA
GCTGCTGAGATAGATGCGGTGGAAGAAAATGTAGAACTGCCACCTGGTGTTGAAGCTTTG
GTGTTGTGGCAGCCTGAAGAAATTGTGGAGGAAGGCTGTAATTTAGTACCTATAATTGTG
GATCCATTGCTTGTTAAGTTCCTTCGTCCTCATCAAAGGGAAGGGGTCCAGTTCATGTTT
GATTGTGTCTCGGGTGCACTTAGTACCTTCAACATTAATGGGTGCATTTTAGCTGATGAT
ATGGGTTTAGGGAAGACTCTGCAATCAATCACTCTACTTTACACTCTTCTTCGCCAGGGA
TTTGATGGAAAACCAATGGTCAGGAAGGCAATAGTTGTGACCCCTACCAGTCTCGTTAGT
AATTGGGAGGCCGAAATCAATAAGTGGGTTGGAGAAAGAGTTAAGCTTGTTGCTTTATGT
GAAAGCACCAGAGATGATGTTGTGTCTGGCATAGAAAGTTTTATTAATTCACTTAGTAAT
TTACAGGTCTTAATTGTTTCCTACGAGACATTTCGAATGCATTCTTCAAAATTTAGTAAT
TCTGGATCATGTGACCTTCTCATATGTGATGAGGCTCACAGACTGAAAAATGATCAAACG
CTGACTAATCGAGCGTTGGCTGCTTTAGCTTGCAAGCGCCGGGTTCTGCTATCAGGGACA
CCAATGCAAAATGATCTAGAAGAGTTTTATGCTATGGTTAATTTCACCAATCCTGGTATC
TTGGGCGATGCTGCACACTTTCGGCGTTATTACGAGGCACCAATAATTTGTGGTAGGGAA
CCCACTGCTGTCGAGGAAGAGAAGAAATTAGGATCTGACCGCTCTGCTGAACTGAGTTCC
AAAGTTAATCAGTTTATTTTGAGGAGGACAAATGCGTTATTGTCAAACCACCTACCACCA
AAGATAATCGAAGTTGTTTGTTGCAAGTTGACACCTCTCCAATCAGATCTATACAATCAT
TTTATACATTCGAAAAATGTGAAACGAGCTATCACTGAAGAAGCAAAGCAATCAAAAATC
TTAGCTTATATAACAGCTCTGAAGAAGCTTTGCAATCATCCGAAGCTGATATACGACACA
ATACGAAGTGGAAGTCCAGGGACATCAGGATTTGAGGACTGCATCCGCTTTTTCCCTCCA
GAAATGTTTTCTGGAAGGTGTGGCTCATGGACTGGCGGATCTGGGTTGTGGGTTGAACTG
TCAGGGAAAATGCATGTCGTAGCCCGGCTACTGGCTCAACTTCGTCAGAAAACTGATGAT
AGGATTGTTTTGGTTTCCAACTACACACAGACGCTGGACCTTTTCTCTCAATTATGCCGT
GAAAGGAGATATCCCTTCTTAAGACTTGATGGAACTACATCAATTAGTAAAAGACAGAAG
CTAGTTAATCGTTTCAATGATCCAACAAAGGATGAGTTTGCATTTCTGTTGAGCAGCAAG
GCTGGAGGTTGTGGTCTTAATTTGATCGGTGGGAACCGTCTGGTTTTGTTTGATCCTGAC
TGGAATCCAGCCAATGACAAACAGGCTGCTGCAAGAATCTGGAGAGATGGACAAAAGAAG
AGGGTCTACATCTATAGGTTTTTGAGTACTGGAACTATTGAAGAAAAGGTCTACCAACGT
CAGATGTCAAAGGAGGGTCTTCAGAAAGTTATTCAGCAGGAACAAATAGATTCTGATATC
CAGGGAAACTTTCTCTCGGCAGAAGACCTGCGGGACCTGTTCACATTTCATGATAGTGTG
AGGTCTGAGATTCATGAAAAAATGAGCTGCAACCGCTGCCAACCAGATGCAGTGATGCCA
GATGACAACCCAATAGCTGATTTCAACACTCAGGGTCTTCAGCCCGACCAAGAGGATATT
GGGGGATTTGCAGGTGTAGCTGGTTGTCTTCATGCATTACGAAGCTCGGAGAAACAGATT
GGAGCTCCAAAGGAAGAGGACTTAGCCAGTTGGGGTCATCATTTTTCCCCAAAATCCGTG
CCAGATGTAATTTTCCAGTCTGCAGCAGGAGACGAGGTTTCTTTTGTTTTCTCTTGCCAA
GTGGATGGGAAGCTTGTGCCTGTTGAATCAACACTAAAACCAAAACAGGAGGTGGAAAAT
AGAGAGTTGTCTCATTTCAAAGAAAAGCTTTTGAAAAAGTCCAATTTTTCATCTCCACGA
CGAGCACCATCATTACCAACATTGTCATCAAGCAAGCAATCCAGCGAGAAGGAAAATTCA
ATTCAGAAACTGAATTTGATATCGCAAGCTCAAGCGCTGTCAACATCAACATCAACTCCT
AATGAAATTTCTCTGAGTACATTACCTGCATTTTTCAAACCTTTGCAAAAGCCAAGAAGC
AAGCTATATAGACCTTTAGAGGATACTAAAATAAACTTGAAGAACAAACTCTTTTCCGAG
AATCATTTGCCCAGAAAGAGATTATCTCCTGATTACATAAATGATGATGATTTTGCCTAG

Peptide Sequence

PEP ID

XP_016506013.1
PEP Infomation

PREDICTED: protein CHROMATIN REMODELING 25-like [Nicotiana tabacum]
Sequence

MEAEEEEEVLSSSERDDSSDEFLCEPDDDIDFESNSGDDDQNVESHAGTSSPDEDRKSQN
VDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYSSTNEHLARRLCARKRFV
PWGSTRPVLLAITNRLHAPEAAEIDAVEENVELPPGVEALVLWQPEEIVEEGCNLVPIIV
DPLLVKFLRPHQREGVQFMFDCVSGALSTFNINGCILADDMGLGKTLQSITLLYTLLRQG
FDGKPMVRKAIVVTPTSLVSNWEAEINKWVGERVKLVALCESTRDDVVSGIESFINSLSN
LQVLIVSYETFRMHSSKFSNSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGT
PMQNDLEEFYAMVNFTNPGILGDAAHFRRYYEAPIICGREPTAVEEEKKLGSDRSAELSS
KVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYNHFIHSKNVKRAITEEAKQSKI
LAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMFSGRCGSWTGGSGLWVEL
SGKMHVVARLLAQLRQKTDDRIVLVSNYTQTLDLFSQLCRERRYPFLRLDGTTSISKRQK
LVNRFNDPTKDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARIWRDGQKK
RVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIDSDIQGNFLSAEDLRDLFTFHDSV
RSEIHEKMSCNRCQPDAVMPDDNPIADFNTQGLQPDQEDIGGFAGVAGCLHALRSSEKQI
GAPKEEDLASWGHHFSPKSVPDVIFQSAAGDEVSFVFSCQVDGKLVPVESTLKPKQEVEN
RELSHFKEKLLKKSNFSSPRRAPSLPTLSSSKQSSEKENSIQKLNLISQAQALSTSTSTP
NEISLSTLPAFFKPLQKPRSKLYRPLEDTKINLKNKLFSENHLPRKRLSPDYINDDDFA

Transcript Sequence

Gene sequence data has not been registered.